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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs62471521 chr7:64928203 A/G 1.06E-7 402 15.57 15.2 2.27 KM Plot
LGG rs62471536 chr7:64937864 A/G 9.18E-8 400 15.57 15.2 2.27 KM Plot
LGG rs62472303 chr7:64938306 G/A 9.18E-8 400 15.57 15.2 2.27 KM Plot
LGG rs62472304 chr7:64939317 T/G 9.18E-8 400 15.57 15.2 2.27 KM Plot
LGG rs637144 chr9:22628656 C/G 0.000182 407 15.6 12.65 8.77 KM Plot
LGG rs6424660 chr1:78501604 C/G 7.93E-8 403 3.93 11.1 15.73 KM Plot
LGG rs6424664 chr1:78512776 T/G 8.0E-8 402 3.93 11.57 15.73 KM Plot
LGG rs6424668 chr1:78516452 A/G 1.33E-15 400 3.93 13.23 15.72 KM Plot
LGG rs6427880 chr1:201113758 C/T 5.01E-5 404 9.28 15.63 15.3 KM Plot
LGG rs6427881 chr1:201117597 C/G 5.92E-5 403 9.28 15.5 15.3 KM Plot
LGG rs6427882 chr1:201117663 C/T 5.92E-5 403 9.28 15.5 15.3 KM Plot
LGG rs6427884 chr1:201119578 T/C 3.89E-5 402 9.28 15.63 15.3 KM Plot
LGG rs6435335 chr2:207075906 G/T 0 398 3.2 16.77 15.17 KM Plot
LGG rs6456804 chr6:27985388 G/T 8.07E-5 407 15.2 15.25 17.18 KM Plot
LGG rs6457878 chr6:36076280 C/T 9.31E-10 407 15.63 15.15 6.15 KM Plot